Minou Bina                         email  

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Bina M.  The genome browser at UCSC for locating genes, and much more!  Mol Biotechnol.  38, 269-75 (2008).

Wyss P, Lazarus SA, Bina M.  A program toolkit for the analysis of regulatory regions of genes.  Methods Mol Biol. 338, 135-52 (2006).

Bina M, Wyss P, Shah SR. A database of 9-mers from promoter regions of human protein-coding genes. Methods Mol Biol. 338, 129-34 (2006).

Bina M. Identification and mapping of paralogous genes on a known genomic DNA sequence. Methods Mol Biol 338, 21-9 (2006). Abstract

Bina M. Use of genome browsers to locate your favorite genes.  Methods Mol Biol. 338, 1-7 (2006).  Abstract

Bina M., Wyss P., Wenhui R., Szpankowski A., Thomas E., Randhawa R., Reddy S., John PM., Pares-Matos EI., Stein A., Xu H., and Lazarus SA.  Exploring the characteristics of sequence elements in Proximal Promoters of Human Genes.  Genomics. 84, 929-940  (2004).  Abstract

Xie, J., Li, K-C., and Bina, M.:  A Bayesian insertion/deletion algorithm for distant protein motif searching via entropy filtering.   Journal of The American Statistical Association.  99 409-420 (2004).

Bina, M., Young, J., and Pares-Matos, E.I.:   A Conceptual Scale for Correlating Cytogenetic and Physical Maps.  Cytogenetic and Genome Research.  97:133-135 (2002).  Pubmed

Bina, M., and Crowley, E.: Sequence Patterns Defining the 5¢ Boundary of Human Genes.  Biopolymers.  59, 347-55 (2001).  Abstract

Bina M., Demmon, S., and Pares-Matos, E.I.:  Syndromes associated with Homo Sapiens Pol II Regulatory Genes.  Prog. Nucleic Acids Res. & Mol. Biol. 64, 171-219 (2000). Abstract

Choe, W., Ersoy O.K. and Bina M.: Neural Network Schemes for Detecting Rare Events in Human Genomic DNA.  Bioinformatics. 16, 1062-1072 (2000).  Abstract

Choe, W., Ersoy O.K. & Bina M.: Rare Event Detection in Genomic Sequences by Neural Networks and Sample Stratification.  Nonlinear Biomedical Signal Processing, ed. by M. Akay, IEEE Press (2000).  

Stein, A. and Bina, M. :A signal encoded in vertebrate DNA that influences nucleosome positioning and alignment. Nucleic Acids Res. 27:848-53 (1999). Abstract

Crowley, E. M., Roeder, K., and Bina, M.: A Statistical Model for Locating Regulatory Regions in Genomic DNA. J. Mol. Biol. 268, 8-14 (1997). Abstract

Bina, M.: Periodicity of Dinucleotides in Nucleosomes Derived from Simian Virus 40 Chromatin. J. Mol. Biol. 235, 198-208 (1994). Abstract

Lowman, H., and Bina, M.: Correlation Between Dinucleotide Periodicities and Nucleosome Positioning on Mouse Satellite DNA. Biopolymers 30, 861-876 (1990). Abstract